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gelidonyamr
gelidonyamr PublicThis Nextflow pipeline, gelidonyAMR, has been developed for analyzing Salmonella Infantis genomes, including genome assembly, antimicrobial resistance (AMR) profiling, MLST and cgMLST typing. It is…
Nextflow 2
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GenomePlatform
GenomePlatform PublicAutomated bacterial genomic analysis · AI clinical interpretation · PCR primer design
Python 1
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phage_analysis
phage_analysis PublicBacteriophage discovery & characterization pipeline (Nextflow DSL2) — FastQC, Kraken2, SPAdes, VirSorter2, CheckV, BACPHLIP, Phrokka, Prokka, vContact2, vHULK, BLAST
Nextflow 2
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pha4ge/pipeline-resources
pha4ge/pipeline-resources PublicBioinformatics Pipeline and Visualization resources
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